Kerian Thuillier

PhD Student, CNRS

Dyliss team, Irisa / Inria Rennes-Bretagne Atlantique,
Campus de Beaulieu, 35042 Rennes Cedex, France.

Email: kerian.thuillier{at}irisa.fr

PhD

Supervisors: Anne Siegel (Dyliss / IRISA, Rennes) and Loïc Paulevé (LaBRI, Bordeau)

PhD subject: Scalable inference of Boolean rules controlling hybrid models of multi-layer biological systems

Keywords: Boolean network, hybrid system, answer set programming, linear programming, system biology

Publications

Thuillier K., Baroukh C., Bockmayr A., Cottret L., Paulevé L., Siegel A. (2021) Learning Boolean Controls in Regulated Metabolic Networks: A Case-Study. In: Cinquemani E., Paulevé L. (eds) Computational Methods in Systems Biology. CMSB 2021. Lecture Notes in Computer Science, vol 12881. Springer, Cham. https://doi.org/10.1007/978-3-030-85633-5_10
Kerian Thuillier, Caroline Baroukh, Alexander Bockmayr, Ludovic Cottret, Loïc Paulevé, Anne Siegel, MERRIN: MEtabolic regulation rule INference from time series data, Bioinformatics, Volume 38, Issue Supplement_2, September 2022, Pages ii127–ii133, https://doi.org/10.1093/bioinformatics/btac479

(2021-2022): Algorithms (TD), Licence 3, ENS Rennes
- Supervisor: François Schwarzentruber
(2021-2022): Logique (TD), Licence 3, ISTIC – Univ. Rennes 1
- Supervisor: Sophie Pinchinat
(2021-2022): Modélisation et Algorithmies des Graphes (TD), Licence 3, ISTIC – Univ. Rennes 1
- Supervisor: Rumen Andonov
(2021-2022): Recherche Opérationnelle (TP), Master 1, ISTIC – Univ. Rennes 1
- Supervisor: Rumen Andonov